FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14740837
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTATAG31900.07.44739779
AACACTA42350.06.2895246
CCACTCA39001.8189894E-126.0915899
ACACTAT46751.8189894E-125.54373077
GCCACTC59800.05.5378088
CACTATA47755.456968E-125.4276328
GCCCTTA58200.05.19501644
Produced by FastQC (version 0.11.5)