FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15935889
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA180800.010.999
AGAGCAC186550.010.496898
GATCGGA215750.09.4661471
AAGAGCA277550.07.3146727
TCGGAAG295700.07.0617563
ATCGGAA312600.06.7034972
GAAGAGC316500.06.4827336
GGAAGAG341000.06.05918935
TACTGAG40801.4806574E-95.34415251
CGGAAGA423000.05.0719364
CTAGATC10807.2759576E-125.06619140-144
Produced by FastQC (version 0.11.5)