FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15935889
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA218100.07.67479371
AGAGCGT220150.07.32481678
AAGAGCG255500.06.87489947
GAGCGTC237050.06.59002739
TCGGAAG292950.05.873163
ATCGGAA313200.05.77216672
GAAGAGC316100.05.7163216
GGGGTAC52700.05.46407658
GGAAGAG352250.05.41579635
TAGATCT66700.05.26755240-44
Produced by FastQC (version 0.11.5)