FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14819883
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA193500.08.14800559
AGAGCAC206300.07.7820458
GATCGGA217600.07.24827861
TCGGAAG280700.05.8488823
AAGAGCA286350.05.8328247
ATCGGAA305550.05.49125582
GAAGAGC328200.05.2206736