FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20542357
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA189400.08.1339389
AGAGCAC198750.07.75128368
GATCGGA243450.06.9757431
TCGGAAG246500.06.6039513
ATCGGAA288500.06.2167852
AAGAGCA274200.06.06473067
CTAGATC11600.05.337485140-144
Produced by FastQC (version 0.11.5)