FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14784900
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC16650.06.2262783140-144
TAGATCG60800.05.7782526140-144
GATCGGA191950.05.7383046140-144
CACACGT117750.05.5147505140-144
AGATCGG226750.05.308469140-144
TTAGATC24100.05.197715140-144
ACACGTC118800.05.090297140-144
Produced by FastQC (version 0.11.5)