FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15355172
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA138650.012.8782579
AGAGCAC167000.011.0800558
GATCGGA166900.010.6212281
TCGGAAG199300.09.0680293
ATCGGAA227100.08.3120992
AAGAGCA242650.07.8037037
GGAAGAG305500.06.434045
GTGAGTG37253.6379788E-126.1904131
CGGAAGA349600.05.6842834
GAAGAGC352850.05.36658436
CTAGATC8505.326001E-95.082364140-144
Produced by FastQC (version 0.11.5)