FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16034944
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA59950.011.5287067
ACACTAT67350.09.835348
CACTATA73350.09.2271359
AAACACT98900.07.9346676
CAAACAC99200.07.11252365
CCACTCA51800.05.8379279
TCAAACA151800.05.4095594
GCCCTTA71250.05.2571124
Produced by FastQC (version 0.11.5)