FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094378

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094378
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17753832
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA78600.08.151635
CAGTGGT95200.07.18521074
GTATCAA131000.05.9899739
GTGGTAT129150.05.46271666
CTAGATC12900.05.3581433140-144
AGCAGTG143000.05.1429752
TGGTATC158000.05.1030747
GGTATCA153650.05.01328138
Produced by FastQC (version 0.11.5)