FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094404

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094404
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14519718
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTG12751.1957309E-79.1446981
CCTAGGG7008.465577E-95.55378785-89
GCCCTAG8051.3351382E-95.36597885-89
CTAGGGT7352.6286216E-85.28932185-89
TGGACTA61850.05.2379678
CCCTAGG7451.9577965E-75.02505285-89
Produced by FastQC (version 0.11.5)