FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13946278
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTCT47450.010.1478811
CACTCTT76200.06.32491542
CCTTCAC192400.05.953361
CCTACAC68950.05.925451
CCTTCAT184800.05.84288451
CCTGCAC230250.05.6401151
CATTACG88150.05.4624721
ATGCATG40006.521077E-95.21522332
CCTGAGC108900.05.0915891
CCTACAT85500.05.03446671
Produced by FastQC (version 0.11.5)