FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15101693
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA37600.09.5734629
GCCACTC64450.06.36705838
CTAGATC4953.4539698E-76.1087165140-144
AGCCACT72400.05.96622477
ACGTTAA28106.094215E-75.6369044
TACGTTA41404.8748916E-105.39120243