FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005095139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005095139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14311147
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA28100.017.4205137
ACACACT38100.012.6592556
ACACTAT48400.010.5601818
CACTATA51050.09.5889269
AACACAC56500.09.555895
CAACACA71500.07.45407064
ATCTAGC16700.06.46628725-29
CTAGCTA17150.06.464527625-29
ACAACAC93400.05.78389173
ATACAAC106300.05.4606281
TATCTAG19850.05.295080725-29
Produced by FastQC (version 0.11.5)