FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005095142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005095142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16308117
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACTA42600.019.4336036
TAAGGGG50000.016.9892582
AGGGGAC58150.014.6082234
GGGGACT57150.014.3599765
GTAAGGG74650.011.2556611
GGACTAC94550.09.1366047
AAGGGGA124100.07.83110573
Produced by FastQC (version 0.11.5)