FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005096635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005096635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19384350
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG51350.08.655417120
CGTATGC63350.08.248394120
TCGTATG63000.07.570919118-119
TCTCGTA82700.07.18996120
CTCGTAT67900.07.1649313120
ATCTCGT100300.06.8265405120
CGTCTGA386800.05.7142353120
ATGCCGT73600.05.304352120
CATCTCG133600.05.259884120
ACACGTC438900.05.227506120
CACGTCT444150.05.098101120
Produced by FastQC (version 0.11.5)