FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005096643

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005096643
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16544967
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG39850.09.797115120
TCGTATG47400.09.377057120
CTCGTAT53400.09.223289120
CGTATGC44150.08.832794118-119
TCTCGTA65300.07.3500834118-119
TATCTCG64250.07.2917986120
ATCTCGT80700.05.873122118-119
CGTCTGA298950.05.2077994118-119
GTATGCC79600.05.20654120
CACGTCT342250.05.177162120
ACACGTC337250.05.1470585120
ATGCCGT55200.05.0053215120
Produced by FastQC (version 0.11.5)