FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005096644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005096644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16544967
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGTATC43000.09.07071120
CGCCGTA42200.08.958196118-119
GCCGTAT41950.08.725579120
CGTATCA38150.07.864514120
TCGCCGT57550.07.5072966120
GCGTCGG39250.07.491225120
GTCGCCG72000.07.000728120
GGTCGCC81100.06.326124118-119
TGGTCGC78250.06.288137118-119
AGTGTAG213800.05.9781704120
GTAGATC189550.05.8881874118-119
TCCGATC18351.2501354E-55.8852466
TCGTGTA309000.05.5733953120
GTGGTCG95900.05.5063076120
ATCTCGG148850.05.482599120
GAGTGTA208000.05.409167118-119
TCTCGGT125750.05.392162118-119
TAGATCT174400.05.3675303120
CGTGTAG306300.05.1327105118-119
CTCGGTG152000.05.132113120
Produced by FastQC (version 0.11.5)