FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005096978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005096978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21692043
Sequences flagged as poor quality0
Sequence length126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCACGA143550.07.3554473120
CACGAGC157450.06.896607120
TCACGAG158850.06.5714564120
TATGCCG40200.06.5663676118-119
AGTCACG165400.06.4562907118-119
ACGAGCT142950.06.4210625120
CGTATGC46800.06.2813044120
CGTCTGA317700.06.21267120
CTCGTAT51950.06.0050607120
TCGTATG48300.05.9620237120
ACACGTC365950.05.88535120
CACACGT415700.05.8304343120
ACGTCTG347100.05.6173096120
AATCTCG77150.05.5988154120
ATCGGAA597850.05.509088120
CGAGCTG195200.05.5013947120
GCACACG448450.05.4982867120
GATCGGA615700.05.378603120
CACGTCT372950.05.316422118-119
ATCTCGT77150.05.2100086120
Produced by FastQC (version 0.11.5)