FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005097067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005097067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21454909
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGATAA347600.013.924438145
CGTGTTA151100.013.3803762
TGTTAGC325800.012.3886664
GTTAGCC328850.012.0533825
GTGTTAG252850.011.3202653
CCGTGTT209600.010.995731
CATGTTA135200.09.1117292
ATGCCGC99350.09.043464145
AACACAA332800.08.817646145
TTAGCCA528450.08.5009166
GACCTCA743350.08.4021786
ATGTTAG139650.08.3023593
TCGTATT35050.08.268999145
AAAAACA1630050.08.165621145
AAAAAAA22435900.08.125786145
TAGCCAG555300.08.1029257
AAAACAA1278400.08.087945145
CCATGTT588500.07.9440111
TGGATAC232350.07.920855145
CTATGTT131450.07.8232431
Produced by FastQC (version 0.11.5)