FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005097076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005097076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10824761
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATCTCGTATGCC1898601.7539417267503643TruSeq Adapter, Index 7 (97% over 36bp)
CTTGTGGAAAGGACGAAACACCGGTCCGCAGGTATGCTTGCGTGAATTCCA200240.1849832989384246No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)