FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005099724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37523125
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTT9969132.656796308942819No Hit
TCGGAGGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGG646040.17217116111731098No Hit
GCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCTTGGCTCACA610660.1627423089095058No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATAAGGCAGTCAACTCCT567530.15124806369405533No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)