FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005099829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44429758
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGAGTATCTCAACTCCTT12595912.8350165670494984No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGAGTATCTCAACTCCT5050821.1368101532310846No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGG3624510.8157843218502338No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATGGAGTATCTCAACTCCT840830.18924928648047104No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGGAGT606970.13661339321272017No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGGAGTATC489460.11016490344151775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)