FastQCFastQC Report
Thu 12 May 2022
EGAF00005099830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40930452
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACTATAACACTCAACTCCTT3408190.8326783197996445No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACTATAACACTCAACTCCT2423590.5921239276810332No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAACTA1059750.2589148050453975No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)