FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005099865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66065985
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAACGCAGACGCGCAACTCCTT4965380.7515788949487395No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAACGCAGACGCGCAACTCCT2373790.35930592724834115No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAACGC2146140.32484795314865883No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)