FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005099867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50158593
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAAGGATCATCCAACTCCTT7551861.5055964588161395No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAAAGGATCATCCAACTCCT4216570.8406475835556232No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAAAG1833400.3655206197669859No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAAAA1011090.20157862083571604No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAAAGGA586070.11684338912776122No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)