FastQCFastQC Report
Fri 27 May 2022
EGAF00005099874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61951675
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGCAACTCCTT11533491.8616913909107382No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGCAACTCCT6729641.0862724857721764No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGCAACTCCT6506651.0502783015955581No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGA3056880.4934297579524686No Hit
AAGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGCAACTCC2172850.3507330512048302No Hit
AGTCGGAGGGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGCAACTCC1967070.317516838729542No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGG1401950.22629735192793415No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGAAGCGT756380.12209193698152633No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGAAGCGTTGC634720.1024540498703223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)