FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005099884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40083115
Sequences flagged as poor quality0
Sequence length30-100
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATCGTGGTCTCAACTCCTT4983551.2433040695564703No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATCGTGGTCTCAACTCCT3837650.9574230944875417No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAATCGTGGTCTCAACTCCT2171070.5416420355553704No Hit
AAGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAATCGTGGTCTCAACTCC784080.19561353951657698No Hit
AGTCGGAGGGGCCAAGCGGTCTTAGGAAGACAAATCGTGGTCTCAACTCC424630.10593737537614031No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAAATC403010.10054358300246875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)