FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005099885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52095701
Sequences flagged as poor quality0
Sequence length30-100
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGCTAATACCAACTCCTT4200660.8063352482770123No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATGGCTAATACCAACTCCT3133880.6015621135417681No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATGG1739080.33382409039855326No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATGGCTAATACCAACTCCT591560.11355255590091783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)