FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005099887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005099887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48844666
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCAGGCTGGTCAACTCCTT2451010.5017968594564656No Hit
CGGAGGCCAAGCGGTCTTAGGAAGACAATCA1324280.27112069923868454No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATCAGGCTGGTCAACTCCT1216370.24902821528148028No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATCAGGCTGGTCAACTCCT551540.11291714022571063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)