FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005100117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60747435
Sequences flagged as poor quality0
Sequence length30-100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCTT9830241.6182148266836287No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCT4448150.7322366779766092No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAATTAGATGCATCAACTCCT639750.10531308852793538No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)