FastQCFastQC Report
Sat 25 May 2024
EGAF00005100195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99513969
Total Bases9.4 Gbp
Sequences flagged as poor quality0
Sequence length30-100
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAGGGTCTCTTACAACTCCTT6536030.6567952284166256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)