FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005100520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40942818
Sequences flagged as poor quality0
Sequence length30-100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATTCAACGGACAACTCCTT3959560.9670951325333786No Hit
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAAATTCAACGGACAACTCCT1354650.33086388924182014No Hit
AGTCGGAGGGCCAAGCGGTCTTAGGAAGACAAATTCAACGGACAACTCCT756450.1847576783796367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)