FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005100718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21831547
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA176900.019.3233781
TCGGAAG180600.018.9506442
CGGAAGA186950.018.2251723
TATGCCG58300.015.41951445-49
CTCGTAT65050.013.79838740-44
CGTATGC66450.013.52833245-49
TCTCGTA65250.013.11162340-44
ATGCCGT71450.012.50046145-49
AGAGCAC294950.011.9939097
GCCGTCT76900.011.822350550-54
AGCACAC307100.011.5193859
GAGCACA314800.011.4909298
ATCTCGT78450.011.20120140-44
GAAGAGC329550.010.7347465
CGTCTTC89400.010.28287150-54
CCGTCTT89900.010.14503750-54
TCGTATG71950.09.855144540-44
TGCCGTC74500.09.34184245-49
GTCACGT100400.09.18456525-29
CGTCTGC101350.09.141993530-34
Produced by FastQC (version 0.11.5)