FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005100747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94415412
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG326400.017.812019
GAGCGTC410850.014.2742488
AGAGCGT473300.012.4979397
CGCCGTA125650.012.20777955-59
ATCGGAA499900.012.0040781
TCGGAAG526800.011.3558752
AAGAGCG582950.010.5201016
CGGAAGA577800.010.4131883
TCGCCGT154000.09.96043855-59
GCCGTAT179750.08.9126555-59
GTCGCCG186850.08.28689155-59
TGGTCGC216000.07.43061350-54
CGTATCA223050.07.182955760-64
GTGGTCG235250.06.86572450-54
TCTCGGT300550.06.53642858
CTCGGTG336200.06.36081849
GCGTAGA100500.06.26225141
CCGTATC204050.06.224163555-59
CGAGTGT272600.06.191130635-39
GTCGGTG124000.06.02149349
Produced by FastQC (version 0.11.5)