FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005100780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67279425
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA474300.023.1955951
TCGGAAG483700.022.7102032
CGGAAGA506850.021.6443213
TATGCCG169300.013.5146445-49
CGATCGA169650.013.34155730-34
AGAGCAC868100.013.0527217
CCGATCG176950.012.84032230-34
AGCACAC895400.012.7438929
GAGCACA933250.012.2735718
CTCGTAT192450.012.08506940-44
GAAGAGC956700.011.9954535
CGTATGC191250.011.9787145-49
TCTCGTA191650.011.40920140-44
CGATATC191900.011.1451635-39
GATCGAT202100.011.106112530-34
ATGCCGT211300.010.98616845-49
TCGTATG210150.010.984440-44
ACCGATC212300.010.77058230-34
TGCCGTC210800.010.75772845-49
GCCGTCT214300.010.622704550-54
Produced by FastQC (version 0.11.5)