FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005100899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73632991
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG292700.014.9349599
GAGCGTC370700.011.9293488
CGCCGTA91000.011.00932955-59
AGAGCGT407100.010.9695427
ATCGGAA450050.09.9506211
TCGGAAG470600.09.5969492
AAGAGCG496650.09.1815166
TCGCCGT110950.09.06893755-59
CGGAAGA503750.08.9509743
GTCGCCG131150.08.18064755-59
GCCGTAT132400.07.91725355-59
TGGTCGC156050.07.11698250-54
CGTATCA162950.06.63768560-64
TCCGGTA161500.06.58045330-34
GTATCCG167700.06.39768730-34
GTGGTCG173750.06.35859350-54
ATCCGGT169000.06.26268430-34
CGGTAGT169700.06.25411335-39
CCGTATC150400.06.169590555-59
TATCCGG176550.06.142684530-34
Produced by FastQC (version 0.11.5)