FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005100998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005100998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74267425
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA457100.012.4514561
TCGGAAG475350.011.9598812
CGGAAGA504100.011.3915963
TATGCCG137450.09.18806245-49
CGTAGCG142400.08.61379630-34
CTCGTAT164150.07.852049440-44
CGTATGC162200.07.786061345-49
TCTCGTA160200.07.593143540-44
GCGTAAT153700.07.556162435-39
TAGCGTA168400.07.214996330-34
ATGCCGT184750.06.961289445-49
AGAGCAC887500.06.9266727
GTAGCGT187300.06.84303430-34
AGCGTAA184100.06.804635-39
AGCACAC935650.06.6553619
TGCCGTC189600.06.622623445-49
TCGTATG190550.06.59678540-44
GAGCACA975700.06.36731538
GCCGTCT200100.06.31130950-54
CGTAATC196650.06.27448735-39
Produced by FastQC (version 0.11.5)