FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005101021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79680108
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG448950.011.1097099
CGCCGTA111800.09.98571755-59
GAGCGTC532350.09.5190248
AGAGCGT585100.08.7474327
TCGCCGT134150.08.3760955-59
GCCGTAT149150.07.767009755-59
ATCGGAA663700.07.6703491
GTCGCCG151150.07.645052455-59
AAGAGCG688500.07.581136
TCGGAAG684300.07.4683292
CGGAAGA713800.07.24087143
TGGTCGC176850.06.76351750-54
CGTATCA187050.06.379535760-64
GTGGTCG193850.06.230213650-54
CCGTATC177250.06.15940955-59
GGTCGCC187550.05.88289850-54
AGATCGG661250.05.328358145
GCGTCGT420650.05.3255005145
GATCGGA609450.05.174567145
CGTCGTG414800.05.1384416145
Produced by FastQC (version 0.11.5)