FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005101079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15658495
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATCGGT15654.274625E-109.2654288
AGCGTCG69800.08.7248319
ATATCGG13503.100049E-78.5928547
GCGTAGA17904.3224645E-87.72002461
GAGCGTC84000.07.42282068
CGTAGAT18709.86056E-87.36691052
CGCCGTA24050.06.812739455-59
AGAGCGT96800.06.74090677
ATATCGC17007.2575145E-56.3972537
GATATCG14755.9048604E-46.39002476
ATCGGAA102500.06.38611461
TCGGAAG106000.06.22456362
ATCGGTG18754.1891733E-56.18659839
TGTCGGT18804.3525484E-56.170388
AAGAGCG116900.05.82994656
TCGCCGT27900.05.716719655-59
AAATCGG27954.8038055E-75.70679247
CGGAAGA114750.05.68617443
GCGTCGT64400.05.2909884145
GCTCGGT23401.7612506E-45.2672378
Produced by FastQC (version 0.11.5)