FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005101080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16080851
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA104350.08.3624941
TCGGAAG109000.08.1155612
CGGAAGA114300.07.92906433
TATGCCG28450.07.237351445-49
CTCGTAT34500.06.051950540-44
CGTATGC33900.05.945503745-49
ATGCCGT38150.05.54921945-49
TCTCGTA36600.05.50662740-44
GCCGTCT40700.05.415720550-54
TGCCGTC40450.05.30538345-49
AGCACAC210650.05.19671739
GCGTAAC34600.05.1543730-34
AGAGCAC199300.05.05617957
Produced by FastQC (version 0.11.5)