FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005101105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48295983
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA62250.07.174000355-59
AGCGTCG291950.07.07647569
GCGTCGG44500.06.841145
GAGCGTC348500.06.11540468
TCGCCGT80700.05.85725555-59
CGTCGTG266250.05.6624455145
AGAGCGT381850.05.58129747
ATCGGAA432200.05.4839478145
GCCGTAT86700.05.318119555-59
GCGTCGT270600.05.0892773145
TAGATCG150650.05.0037374145
Produced by FastQC (version 0.11.5)