FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005101141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28412656
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA29500.08.35600655-59
TCGCCGT38050.06.821347755-59
AGCGTCG138150.06.349173145
AGATCGG225300.06.338518145
TCGTGTA136050.06.127481145
GCGTCGG20502.3749988E-56.011429145
GCCGTAT44850.05.851779555-59
GATCGGA206350.05.515411145
GTCGCCG47900.05.509443355-59
ATCGGAA220150.05.2355356145
GCGTCGT129450.05.151912145
CGGAAGA235050.05.1503754145
TGGTCGC53700.05.048399450-54
AGAGCGT189800.05.003314145
Produced by FastQC (version 0.11.5)