FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005101154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005101154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67775129
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA326950.09.6184351
TCGGAAG341700.09.3141452
CGGAAGA370400.08.7293873
TATGCCG105250.07.922111545-49
CGTATGC126100.06.681227745-49
CTCGTAT127850.06.555352740-44
TCTCGTA123750.06.40930740-44
ATGCCGT149800.05.88554945-49
GCCGTCT157350.05.436449550-54
ATCTCGT162150.05.15079840-44
Produced by FastQC (version 0.11.5)