FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005102168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92400039
Sequences flagged as poor quality0
Sequence length30-150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1947080.21072285478147906No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1914900.20724017226875843No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1861080.20141549940254896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)