FastQCFastQC Report
Thu 12 May 2022
EGAF00005102172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63369160
Sequences flagged as poor quality0
Sequence length30-150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1353720.21362441919697217No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1320050.2083111090631468No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1277130.20153809834310568No Hit

[OK]Adapter Content

Adapter graph