FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005102190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69756710
Sequences flagged as poor quality0
Sequence length30-150
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1365000.1956801001652744No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1207270.17306865533079183No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1037300.14870254058713492No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)