FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005102194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90127101
Sequences flagged as poor quality0
Sequence length30-150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT2215910.24586500346882342No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT2156260.2392465724599308No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1916910.21268963261117207No Hit
CTCCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGG978500.1085688976060597No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG927620.10292353683937976No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)