FastQCFastQC Report
Thu 12 May 2022
EGAF00005102196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63493169
Sequences flagged as poor quality0
Sequence length30-150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1172130.18460726066452912No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1101090.1734186554777255No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1050800.16549811838813716No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)