FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005102336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73848648
Sequences flagged as poor quality0
Sequence length30-150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1618680.21918884689669607No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1226500.16608293221563108No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC951020.12877960880204603No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG792900.10736824863740227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)