FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005102357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55844958
Sequences flagged as poor quality0
Sequence length30-150
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT733530.1313511597591317No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT627330.11233422361961486No Hit
CTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCT624170.11176837128250683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)